BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038C09LP1|AL430517
(880 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig794 1626 0.0
>3x_Contig794
Length = 3106
Score = 1626 bits (809), Expect = 0.0
Identities = 851/873 (97%), Gaps = 2/873 (0%)
Strand = Plus / Minus
Query: 1 gatcaattgaaacaaggtgttgataaaaataatagacagccaactaaggaagatggtttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2610 gatcaattgaaacaaggtgttgataaaaataatagacagccaactaaggaagatggtttg 2551
Query: 61 agatattagaaacaacgatgacgaattactgccaagttcgagaaatcgtagaaagacaat 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2550 agat-ttagaaacaacgatgacgaattactgccaagttcgagaaatcgtagaaagacaat 2492
Query: 121 cgatcagtctaagawaggttaatgagaatwaggagaagattgawaacttaaagaacttaa 180
|||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 2491 cgatcagtctaaga-aggttaatgagaataaggagaagattgaaaacttaaagaacttaa 2433
Query: 181 ttagggaaaagaaggaattgcttgcctcggaaaaattaagattggaaaatgactcgcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2432 ttagggaaaagaaggaattgcttgcctcggaaaaattaagattggaaaatgactcgcaaa 2373
Query: 241 gaaagcagtytgaaaatgctgatctattacggtcaattgawaatttgawatctcaaattc 300
||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 2372 gaaagcagtctgaaaatgctgatctattacggtcaattgaaaatttgaaatctcaaattc 2313
Query: 301 aagcgttgccctcaacctcaaaawaatcaccttctgcwaacwatgctgtgccacatgatt 360
||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||
Sbjct: 2312 aagcgttgccctcaacctcaaaaaaatcaccttctgcaaacaatgctgtgccacatgatt 2253
Query: 361 tacaatccagatttgatactttgacagccagaattccaaacctttttaaagaaatttctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2252 tacaatccagatttgatactttgacagccagaattccaaacctttttaaagaaatttctg 2193
Query: 421 atgtgagctaagaattggtttcaagtcagttggcattgcaccacttgaaggtagatcatc 480
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2192 atgtgagcaaagaattggtttcaagtcagttggcattgcaccacttgaaggtagatcatc 2133
Query: 481 caatccgtggtagtggcccaaactgtaaaatcactgagttagactgttagawtgctaggc 540
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||
Sbjct: 2132 caatccgtggtagtggcccaaactgtaaaatcactgagttagactgtaagaatgcaaggc 2073
Query: 541 aaagactgaccctgactgcwggaatgtgtactttagtcggtagacctgaaccaaattacg 600
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2072 aaagactgaccctgactgcaggaatgtgtactttagtcggtagacctgaaccaaattacg 2013
Query: 601 ataatttggaggcacaagcacaacatttcaacgaaggaattgatactatcgawaaagatg 660
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 2012 ataatttggaggcacaagcacaacatttcaacgaaggaattgaaactatcgaaaaagatg 1953
Query: 661 atcaawagawccaatctgccatcaataacatcagtacctggattcaagagatctcttctt 720
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1952 atcaaaagaaccaatctgccatcaataacatcagtacctggattcaagagatctcttctt 1893
Query: 721 cggtgcaagctataattcamggaagaactcmttcaatgggcctcgaaatggataaatggg 780
||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 1892 cggtgcaagctataattcacggaagaactccttcaatgggcctcgaaatggataaatggg 1833
Query: 781 aatctggtatcggtctagaaccagaagtcagagamtttatcatatcttggaaaaacagaa 840
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1832 aatctggtatcggtctagaaccagaagtcagagactttatcatatcttggaaaaacagaa 1773
Query: 841 gaaacttcgataattcttcttacaataccgcag 873
|||||||||||||||||||||||||||||||||
Sbjct: 1772 gaaacttcgataattcttcttacaataccgcag 1740
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6230
Number of Sequences: 1807
Number of extensions: 6230
Number of successful extensions: 132
Number of sequences better than 1.0e-20: 1
length of query: 880
length of database: 10,358,551
effective HSP length: 16
effective length of query: 864
effective length of database: 10,329,639
effective search space: 8924808096
effective search space used: 8924808096
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (101.0 bits)